Just give it time.
In most cases, bench >= squat means a young bloke who mainly just benches and avoids working legs. Typically with such a guy, chest is stronger than back, which is stronger than legs. That's backwards. Ideally, legs > back > chest.
However, if someone works legs, pull and push consistently, well everyone has their strengths and weaknesses, so there might be funky imbalances to begin with. However, that consistent work will make things balance up. At some point soon your bench will slow down or stall in progress and your squat will keep getting stronger.